CDS

Accession Number TCMCG007C21159
gbkey CDS
Protein Id XP_009135014.1
Location join(16585530..16585781,16585868..16586002,16586085..16586249,16586345..16586365,16586451..16586658,16586940..16587021,16587378..16587486,16587580..16587696,16587772..16587996)
Gene LOC103859255
GeneID 103859255
Organism Brassica rapa

Protein

Length 437aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009136766.2
Definition polygalacturonase QRT2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category G
Description Polygalacturonase
KEGG_TC -
KEGG_Module M00081        [VIEW IN KEGG]
KEGG_Reaction R01982        [VIEW IN KEGG]
R02360        [VIEW IN KEGG]
R07413        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01184        [VIEW IN KEGG]
ko:K01213        [VIEW IN KEGG]
EC 3.2.1.15        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
3.2.1.67        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000272        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004650        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009827        [VIEW IN EMBL-EBI]
GO:0009830        [VIEW IN EMBL-EBI]
GO:0009838        [VIEW IN EMBL-EBI]
GO:0009900        [VIEW IN EMBL-EBI]
GO:0009901        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010047        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042737        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044277        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045490        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048232        [VIEW IN EMBL-EBI]
GO:0048235        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048443        [VIEW IN EMBL-EBI]
GO:0048466        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048653        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0055046        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATCAAAAGACCATAATCTTCTTAACAATACTCTTAACGTCTCTTCGCTCTTGTTCTAGCAGCTACCCGTTTGATCCTAGATATGAACATTCCATATCTCCCAATGTTTATTATGAAACCAATCACCAACACGGTCACATTACACACAACAGGCACATGAAAGATCCCCATGCCGCTCCTAGATCTTCTCCTCGAGCTTTTAACGTCAACTCTTTCGGGGCTAAAGCCAATGGAAACGACGATTCTCAGGCATTCATGAAAGCTTGGGAAGCAGCTTGTTCGTCAAAGGGAACAGCTTACATCGTTGTTCCGGAAAATAGAGCTTACACTCTTAAACCGGTTAAATTCTCCGGTCCATGTAAATCATCCATGATTGTTTTTAAGATTTACGGTAAGATTGAGGCATGGAAAAACCCATCAGACTACAGGGAACGTGGGTTCTGGATTGTTTTCCAAACGGTTGATAACCTTCGTGTTGAAGGCGGTGGACGCGTCGATGGTAATGGAAAAATCTGGTGGCCAAAATCTTGCAAGATCAACCCTGAACTTCCATGCCAGGAAGCTCCCACGGCGGTAACGTTTGTGGAATGCAACAACTTGATGGTAAGAAACATAAGGTTGGAAAACGCACAGCAAATGCATATGAGGGTTCAAAAATGCGAAAACGTGAAGGCTTTGAATCTTATGGTCAAGTCTCCGGGTGATAGTCCTAACACCGATGGCATTCACGTTACCGGAACTCGCAATATCCTCATTCAGGACTCTATCATCCGTACTGGTGATGACTGTATATCTATAGTGAGTGGGTCGGAGAATGTGAGAGCGACGGGCATTACATGCGGGCCGGGTCATGGAATCAGCATTGGGAGTTTGGGAGCTCATAACTCAGAAGCATATGTTTCTAATGTGGTAGTCAGCAAAGCAACTCTCATAGGAACCACTAATGGTGTGAGAATTAAGACTTGGCAGGGAGGACATGGAATGGCAAAGAACATAATATTCAAAGACATCTTAATGAAAAACGTTACAAACCCAATAATCATCAACCAGAACTATTGTGATCAAACTAAAGCATGTCCCGAACAGAAATCTGCGGTACAAGTGAGCAATGTATTGTACAAAAACATACATGGGACGAGTTCAAGTCCCGAAGCTATAAAATTTGTGTGCAGCAAGAGCATTCCATGTCAAGGCATTTCATTGCAAAACGTTGAACTGGTCGATCAAAATACCAAACAAGATGTCTCTAAAGCAACTTGCTCGAATGTGAAGTTAAAGAGTAGCGGACGTCTTTCCTCCCTTTGCACTTGA
Protein:  
MYQKTIIFLTILLTSLRSCSSSYPFDPRYEHSISPNVYYETNHQHGHITHNRHMKDPHAAPRSSPRAFNVNSFGAKANGNDDSQAFMKAWEAACSSKGTAYIVVPENRAYTLKPVKFSGPCKSSMIVFKIYGKIEAWKNPSDYRERGFWIVFQTVDNLRVEGGGRVDGNGKIWWPKSCKINPELPCQEAPTAVTFVECNNLMVRNIRLENAQQMHMRVQKCENVKALNLMVKSPGDSPNTDGIHVTGTRNILIQDSIIRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGAHNSEAYVSNVVVSKATLIGTTNGVRIKTWQGGHGMAKNIIFKDILMKNVTNPIIINQNYCDQTKACPEQKSAVQVSNVLYKNIHGTSSSPEAIKFVCSKSIPCQGISLQNVELVDQNTKQDVSKATCSNVKLKSSGRLSSLCT